Tutorial on how to use the Jmol export to web function. Either you do not have Java applets enabled in your web browser or your browser is blocking this applet. Check the warning message from your browser and/or. Another choice is to save from Jmol both the model data and the current orientation, rendering, color, etc. For that, you use the pop-up menu and File > Export.

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Recent versions of Jmol application and signed applet can export models to several formats that specify three-dimensional objects and can be read by specialized software 3D-world or 3D-scenes. This can be done exlort script or from the pop-up menu.

The vrml or wrl file can then be opened using several programs and browser plugins, and manipulated in 3D using the mouse. It is also one of the common formats for sending to a 3D printerin order to get a physical model in your hands.

As a result, atoms are not spheres, but polyhedra with many faces visible when zooming in closely. Blender is a free, open source, 3D content creation suite, available for all major operating systems under the GNU General Public Exlort.


Features are nearly identical to those of VRML.

Jmol Wiki – File formats/3D Objects

See VRML for details. This would allow future web browsers to display 3D content natively, without any plugins or applets. Jmol can export, with limited features, the current view of a model into Maya ascii format. Wikipedia info on Maya.

File formats/Coordinates

This option is not available from either the top menu or the popup menu; it must be done from the console command line or from a script file. This syntax is enough:. Two files will be generated: The 2nd is referenced from the 1st, so you should keep exoort together for loading into any other software. If the materials file is missing your model will be monochrome.

File formats/Export

Note that in these OBJ files, atoms are true spheres and not many-faced-polyhedra. Jmol can export an image of the model into a pdf document single page, just the image in the center.


Just use the methods for exporting images and choose pdf format in the drop-down list. The most interesting feature of this format is that it can be embedded in pdf filesproviding a 3D experience inside this well established standard for publication.

There are, however, some problems in implementing this format in Jmol and so in successfully producing PDF files more directly. This can be done from script or from the pop-up menu, only from the Jmol application and the JSmol-Java modality.

This is a popular format for sending to a 3D printerin order to get a physical model in your hands. Note, however, that the STL format does not exporrt colorsso the whole model will have a single color. The described objects are handled as isosurfaces in Jmol, so.

File formats for ray tracing images. Retrieved from ” http: Views Page Discussion View source History. Personal tools Log in.

Jmol links Website Sourceforge.